dor_id: 4160606

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510.0.#.a: Sistema Regional de Información en Línea para Revistas Científicas de América Latina, el Caribe, España y Portugal (Latindex); SCOPUS

561.#.#.u: http://www.fciencias.unam.mx/

650.#.4.x: Biología y Química

336.#.#.b: article

336.#.#.3: Artículo de Investigación

336.#.#.a: Artículo

351.#.#.6: https://herpetologia.fciencias.unam.mx/index.php/revista

351.#.#.b: Revista Latinoamericana de Herpetología

351.#.#.a: Artículos

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270.1.#.p: Revistas UNAM. Dirección General de Publicaciones y Fomento Editorial, UNAM en revistas@unam.mx

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270.#.#.d: MX

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883.#.#.q: Dirección General de Publicaciones y Fomento Editorial

850.#.#.a: Universidad Nacional Autónoma de México

856.4.0.u: https://herpetologia.fciencias.unam.mx/index.php/revista/article/view/919/633

100.1.#.a: Rueda Isaza, Xilena; Carrillo Restrepo, Jhan C.; Saavedra Porras, Susan; Martínez Cerón, Juan M.; Diaz Nieto, Juan Fernando

524.#.#.a: Rueda Isaza, Xilena, et al. (2024). DNA BARCODES AND DIVERSITY OF AMPHIBIANS AND REPTILES IN AGROECOSYSTEMS OF THE COLOMBIAN ANDES. Revista Latinoamericana de Herpetología; Vol. 7 Núm. 3, 2024: Anfibios y Reptiles: Diversidad e Historia Natural; e919, 24 - 47. Recuperado de https://repositorio.unam.mx/contenidos/4160606

245.1.0.a: DNA BARCODES AND DIVERSITY OF AMPHIBIANS AND REPTILES IN AGROECOSYSTEMS OF THE COLOMBIAN ANDES

502.#.#.c: Universidad Nacional Autónoma de México

561.1.#.a: Facultad de Ciencias, UNAM

264.#.0.c: 2024

264.#.1.c: 2024-07-12

653.#.#.a: diversidad filogenética ; aguacate; Persea americana; códigos de barra; BOLD; Suramérica; Phylogenetic diversity; avocado; Persea americana; BOLD; South America; species identification

506.1.#.a: La titularidad de los derechos patrimoniales de esta obra pertenece a las instituciones editoras. Su uso se rige por una licencia Creative Commons BY-SA 4.0 Internacional, https://creativecommons.org/licenses/by-sa/4.0/legalcode.es, para un uso diferente consultar al responsable jurídico del repositorio por medio del correo electrónico leticia.ochoa@ciencias.unam.mx

884.#.#.k: https://herpetologia.fciencias.unam.mx/index.php/revista/article/view/919

001.#.#.#: 107.oai:ojs.herpetologia.fciencias.unam.mx:article/919

041.#.7.h: eng

520.3.#.a: We aim to characterize the diversity of amphibians and reptiles associated with plantations of avocado cv. Hass (Persea americana) in the department of Risaralda, Colombia from an ecological, molecular, and evolutionary perspective. Two sampling periods were implemented between 2019 and 2020 using visual encounter surveys; rarefaction curves and species richness estimators were used to evaluate the completeness of the sampling. Identification of the material was based on both morphological characters as well as DNA barcoding methods sequencing the mitochondrial cytochrome C oxidase subunit I (COI) marker. We also used the COI sequences to construct phylogenies and evaluate the phylogenetic diversity (PD) of the community. Seven amphibian and 18 reptile species were recorded, for which 49 COI sequences were obtained, 15 of which represent the first sequence barcoding records for Colombia. We also found 12 instances of incongruence between the morphological and DNA barcoding identification methods, and we provide a discussion on the correct identification. Finally, although we commonly observed a positive relationship between species richness and PD, we also found that PD can provide valuable information when species richness values are uninformative at comparing two communities. Our results support the need for a greater sampling effort in the area to recognize its true diversity, as this will allow a better understanding of the complex dynamics present in modified landscapes. Also, we conclude with the great contribution of DNA barcoding studies at a small geographical scale and support the use of the COI marker as a suitable source of information for species identification and evaluating the diversity of communities from a historical perspective.

773.1.#.t: Revista Latinoamericana de Herpetología; Vol. 7 Núm. 3 (2024): Anfibios y Reptiles: Diversidad e Historia Natural; e919 (24 - 47)

773.1.#.o: https://herpetologia.fciencias.unam.mx/index.php/revista

022.#.#.a: ISSN electrónico: 2594-2158

310.#.#.a: Semestral

300.#.#.a: Páginas: 24-47

599.#.#.a: 107

264.#.1.b: Facultad de Ciencias, UNAM

doi: https://doi.org/10.22201/fc.25942158e.2024.3.919

handle: 008d4d1974649770

harvesting_date: 2024-11-01 00:00:00.0

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245.1.0.b: CÓDIGOS DE BARRAS DE ADN Y DIVERSIDAD DE ANFIBIOS Y REPTILES EN UN AGROECOSISTEMA DE LOS ANDES DEL NORTE

last_modified: 2024-11-01 00:00:00

license_url: https://creativecommons.org/licenses/by-sa/4.0/legalcode.es

license_type: by-sa

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Artículo

DNA BARCODES AND DIVERSITY OF AMPHIBIANS AND REPTILES IN AGROECOSYSTEMS OF THE COLOMBIAN ANDES

Rueda Isaza, Xilena; Carrillo Restrepo, Jhan C.; Saavedra Porras, Susan; Martínez Cerón, Juan M.; Diaz Nieto, Juan Fernando

Facultad de Ciencias, UNAM, publicado en Revista Latinoamericana de Herpetología, y cosechado de Revistas UNAM

Licencia de uso

Procedencia del contenido

Cita

Rueda Isaza, Xilena, et al. (2024). DNA BARCODES AND DIVERSITY OF AMPHIBIANS AND REPTILES IN AGROECOSYSTEMS OF THE COLOMBIAN ANDES. Revista Latinoamericana de Herpetología; Vol. 7 Núm. 3, 2024: Anfibios y Reptiles: Diversidad e Historia Natural; e919, 24 - 47. Recuperado de https://repositorio.unam.mx/contenidos/4160606

Descripción del recurso

Autor(es)
Rueda Isaza, Xilena; Carrillo Restrepo, Jhan C.; Saavedra Porras, Susan; Martínez Cerón, Juan M.; Diaz Nieto, Juan Fernando
Tipo
Artículo de Investigación
Área del conocimiento
Biología y Química
Título
DNA BARCODES AND DIVERSITY OF AMPHIBIANS AND REPTILES IN AGROECOSYSTEMS OF THE COLOMBIAN ANDES
Fecha
2024-07-12
Resumen
We aim to characterize the diversity of amphibians and reptiles associated with plantations of avocado cv. Hass (Persea americana) in the department of Risaralda, Colombia from an ecological, molecular, and evolutionary perspective. Two sampling periods were implemented between 2019 and 2020 using visual encounter surveys; rarefaction curves and species richness estimators were used to evaluate the completeness of the sampling. Identification of the material was based on both morphological characters as well as DNA barcoding methods sequencing the mitochondrial cytochrome C oxidase subunit I (COI) marker. We also used the COI sequences to construct phylogenies and evaluate the phylogenetic diversity (PD) of the community. Seven amphibian and 18 reptile species were recorded, for which 49 COI sequences were obtained, 15 of which represent the first sequence barcoding records for Colombia. We also found 12 instances of incongruence between the morphological and DNA barcoding identification methods, and we provide a discussion on the correct identification. Finally, although we commonly observed a positive relationship between species richness and PD, we also found that PD can provide valuable information when species richness values are uninformative at comparing two communities. Our results support the need for a greater sampling effort in the area to recognize its true diversity, as this will allow a better understanding of the complex dynamics present in modified landscapes. Also, we conclude with the great contribution of DNA barcoding studies at a small geographical scale and support the use of the COI marker as a suitable source of information for species identification and evaluating the diversity of communities from a historical perspective.
Tema
diversidad filogenética ; aguacate; Persea americana; códigos de barra; BOLD; Suramérica; Phylogenetic diversity; avocado; Persea americana; BOLD; South America; species identification
Idioma
eng
ISSN
ISSN electrónico: 2594-2158

Enlaces